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3-hydroxypipecolic acid

February 23rd, 2008 by Natural Product


Today (time to writing posts – at leats!) – some quite simple-looking target: 3-hydroxypipecolic acid. The structure of this target is drawn below (just click on image and enjoy new system of showing pictures on this blog ;) ):

Structure of (2S,3R)-3-hydroxypipecolic acid

As you can see – it really doesn’t look terrible: two stereocentres and only one ring. It’s hard to believe that only several approaches to such system was developed (authors of paper claim: only four approaches). Let’s say something about biological properties of (2S,3R)-3-hydroxypipecolic acid… Well, structural feature of 3-hydroxypipecolic acid is preasent in many natural and non-natural compounds, for example tetrazomine which was isolated from Saccharothrix mutabilis and exhibiting antitumor activity (3-hydroxypipecolic acid subunit is marked):

Structure of tetrazomine

The retrosynthesis of (2S,3R)-3-hydroxypipecolic acid is shown below:


Retrosynthesis of (2S,3R)-3-hydroxypipecolic acid

(Click on image to enlarge it)

Retrosynthesis is very interesting because of usage of oxazoline moiety to construct stereoselectively piperidine skeleton. Nice way to do such systems, in my opinion. Also synthesis of oxazoline from acyclic precursor looks nice, especially stereochemistry of that reaction. Let’s look at synthesis of 3-hydroxypipecolic acid:

Synthesis of 3-hydroxypipecolic acid Synthesis of 3-hydroxypipecolic acid

(Click on image to enlarge it)

Compound 3 is converted to oxazoline 4 by treatment palladium(0) complex with triphenylphosphine and K2CO3. In my opinion mechanism involves forming π allyl-palladium complex with parallel removal of OAc group. It means that in this step one stereocentre in destroyed (in my opinion of course), but second stereocentre govern stereochemistry of oxazoline ring-closure. Probably K2CO3 act as base which can detach hydrogen atom from NH group. Next cyclization occurs. But I can be wrong – Have you got any other suggestions?

4 is then converted to corresponding aldehyde, 5, by ozonolysis. Next, Wittig-Horner reaction is undergone and in that way α,β-unsaturated ester, 6, is formed. 6 can be then saturated by L-Selectride in t-BuOH/THF to form 7. Next hydrogenolysis occurs which produces piperidine skeleton. Other interesting step is selective TBS-deprotection: only primary alcohol group is deprotected, secondary OH group doesn’t react in such (AcOH + H2O + THF) conditions.

My retrosynthetic approach is shown below… Well… in comparsion with mentioned retrosynthesis, my analysis looks like a little bit… childish ;)

My retrosynthesis of 3-hydroxypipecolic acid

I’ve tride to apply in this case malonic ester-type synthesis… But this is only my try ;)

For more see:

V.-T. Pham et al., Tetrahedron: Asymmetry, 2008, 19, 318.

This entry was posted on Saturday, February 23rd, 2008 at 11:59 pm and is filed under Articles. You can follow any responses to this entry through the RSS 2.0 feed. You can leave a response, or trackback from your own site.

3 responses about “3-hydroxypipecolic acid”

  1. eeeaa said:

    maybe it’s better this way:

    http://grono.net/pub/u/1288874/gallery/photo/56664339/full/

  2. zyp said:

    Hey, im a liitle late :o )

    i´ve wondered that such a simple looking molecule was made in such a complicated way.
    i know its silly to think my way is an better way, but if you are interested have a look to the uploaded pic.

    http://i43.tinypic.com/15mzs6p.jpg

  3. WSTV-FM » Blog Archive » Nitrosobenzene said:

    [...] Total synthesis of (2S,3R)-3-hydroxypipecolic acid | Total … [...]

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